CDS

Accession Number TCMCG049C11443
gbkey CDS
Protein Id XP_034898177.1
Location complement(join(25211..25296,25756..25934,26264..26348,26444..26674,27427..27487,27607..27677,27763..27869,27955..28087,28183..28333,28439..28541,28657..28735,28770..28799,28887..28959,28961..29044,33795..33914,34042..34179))
Gene LOC118036566
GeneID 118036566
Organism Populus alba

Protein

Length 576aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA638679
db_source XM_035042286.1
Definition LOW QUALITY PROTEIN: ribosome biogenesis protein BOP1 homolog [Populus alba]

EGGNOG-MAPPER Annotation

COG_category J
Description Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14824        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000463        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070545        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGATTTTTCTTTCAAGGCGAAAGATTAATGATGAGTACAACGATGAGGAGGTAGAGTTGACAAAAGAAGAAACCAAACTTATTCGTAGAGTGCTCAAAGGAAAGGCTCCACATGGTGACTTTGATCCATATGCGCCTTACGTTGATTGGTTTAAATGGGAAGATTCAAAGCATCCATTGTCAAATGCACCAGAGCCTAAGGCTCCGTTTGTTTACTGGAAAGTAGTTTCCTTTTGGAAAGTGAATTCCAAGAAAGTTCTTGGACTAGTTAGGGCAATTCGAAAAGGATTAATAAAATTTGACAAGCCAAAAGAAGAACCTCGTTTCTACATGTTGTGGGGGGATGATGCTAGCTCATCAGAAAAGACTGGCCATTTATCTTACATTCCTACTCCAAAACCGAATTTGCCAGGCCATGAGGAGTCCTACAATCCTTCTCTAGAATACATCCCAACACAAGAGGAGATCAATTCTTATCAGTTAATGGATGAAGAAGACCGACCTAAATTTATACCTAAAAGGTTTACATCTTTAAGGAGCATCCCAGCATATGAAAATGCTGTTAAAGACTCTTTTGAGCGCTGTCTGGATTTATACTTGTGCCCTAGAGTTCGCAAGAAACGTATTAATATTGATCCTGAGTCTTTGAAGCCTAAGCTGCCAAGCCGAAAAGATCTCAAACCTTACCCAGCAACATGCTATCTTGAGTATAGAGGGCACAAGGGTGCAGTTATGTCAATTTCCACTGAAGCTTCAGGACAGTGGATTGCTTCAGGTTCAAGTGATGGAACTGTGCGATTGTCGGAGGTTGAGACATGTAGATGTATTAAAGTCCGGGAATTTGGTGAAGTTGTCCAATATGTAGCATGGAATCCTTTGCCGGAACTTCCTATATTGGCTGTCTCTGTGGGACAAGATGTGTTCCTTTTGAACACTGGGTTGGGAAATGAAGAAACACAGAGAAAAGTTAAGGAGCTTCTGCATGTCGCGACATCTACAGTTCTAGATGATTCTGGTAACAAGTTGTCTGCTTGGAACTGGCTTCAAGATGACGAACATGAAGGAATCAGGTTACGGCATTTTAAGACTGTATACTCAGTGGAATGGCATCGTAAGGGAGACTATTTCTCAACAGTGATGCCAGCTGGTGATTCAAAAGCAATTCTTATCCACCAGCTCTCAAAGAAATTTACACAAAGACATCCATTTAAGCTGCATGGACTTCCGGTAATGTCAGCAGTTTTTCATCCTACTCGCTCCATCTTCTTTGTCTCAACAAAGAAGAATGTTCGTGTTTATGATCTCTTGAAGCAAAAGCTGATCAAGAAGCTGGAGACTGGATTACGAGAAGTTTCCTCAATTTCAGTTCATCCTACTGGTGACAATGTAATTGTGGGAAGCAGAGATGGAAAGTTATGTTGGTTTGACATGGACCTTTCATCTAAACCTTACAAAGTTCTCAAGTGTCATCCCAAAGACATAACCAATGTGGCCTTCCATCGTTCATACCCACTATTTGCATCATGCTCTGATGACTGCACTGCGTATGTTTTTCACGGCATGGTTTATTCTGATCTCAATCAGAATCCTCTTATTGTTCCCTTGGAAATTCTCCGTGGACATGCAAGTTCAAATGGAAGAGGAGTATTGGACTGCAAGTTCCACCCACGGAAACCGTGGTTATTCACTGCCGGTGCTGATTCTTTGATAAAACTTTATTGTCACTAA
Protein:  
MLIFLSRRKINDEYNDEEVELTKEETKLIRRVLKGKAPHGDFDPYAPYVDWFKWEDSKHPLSNAPEPKAPFVYWKVVSFWKVNSKKVLGLVRAIRKGLIKFDKPKEEPRFYMLWGDDASSSEKTGHLSYIPTPKPNLPGHEESYNPSLEYIPTQEEINSYQLMDEEDRPKFIPKRFTSLRSIPAYENAVKDSFERCLDLYLCPRVRKKRINIDPESLKPKLPSRKDLKPYPATCYLEYRGHKGAVMSISTEASGQWIASGSSDGTVRLSEVETCRCIKVREFGEVVQYVAWNPLPELPILAVSVGQDVFLLNTGLGNEETQRKVKELLHVATSTVLDDSGNKLSAWNWLQDDEHEGIRLRHFKTVYSVEWHRKGDYFSTVMPAGDSKAILIHQLSKKFTQRHPFKLHGLPVMSAVFHPTRSIFFVSTKKNVRVYDLLKQKLIKKLETGLREVSSISVHPTGDNVIVGSRDGKLCWFDMDLSSKPYKVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHASSNGRGVLDCKFHPRKPWLFTAGADSLIKLYCH